fossil: Palaeoecological and Palaeogeographical Analysis Tools

The fossil package is designed to be used by palaeoecologists and palaeobiogeographers (although will likely be of interest to others), providing to them a set of useful tools including species similarity indices, species estimators, minimum spanning tree/forest functions, and an assortment of other useful tools. The package consists of a set of analytical tools useful in analysing ecological and geographical data sets, and includes functions for estimating species richness (Chao 1 and 2, ACE, ICE, Jacknife), shared species/beta diversity, species area curves and geographic distances.

The package can be found on the CRAN website at

A more complete description of the individual functions can be found in my publication in Palaeontologia Electronica.

Vavrek, Matthew J. 2011. fossil: palaeoecological and palaeogeographical analysis tools. Palaeontologia Electronica, 14:1T.

Leave a Reply

Fill in your details below or click an icon to log in: Logo

You are commenting using your account. Log Out / Change )

Twitter picture

You are commenting using your Twitter account. Log Out / Change )

Facebook photo

You are commenting using your Facebook account. Log Out / Change )

Google+ photo

You are commenting using your Google+ account. Log Out / Change )

Connecting to %s